Discriminative motif search report

Parameters and settings

Positive sequence file: E:\Projects\disc-motif\milestone-0728\example_seqs_pos.fasta
Negative sequence file: E:\Projects\disc-motif\milestone-0728\example_seqs_neg.fasta
Motif width: 6
Number of motifs: 1
Motif cardinality: 4
Check both strands of input sequences: No
Number of iterations run: 5
Limit k-mer counts per sequence to a maximum of 2: Yes

Output files

Html report file (this file): E:\Projects\disc-motif\milestone-0728\discmotif_reports\disc_motif_report.html
Plain text file: E:\Projects\disc-motif\milestone-0728\discmotif_reports\disc_motif_result.txt
You may query STAMP to find matches to known motifs in the program interface directly, or you can submit the plain text result file to STAMP manually to allow for more customizations.

Discriminative motifs found by the program

Number	Sequence log representation	Matrix representation	Score
Motif 1		A [0.00 0.00 0.00 0.00 0.00 0.00] C [1.00 0.00 0.00 1.00 1.00 0.00] G [0.00 1.00 1.00 0.00 0.00 1.00] T [0.00 0.00 0.00 0.00 0.00 0.00]	5.285e-03